aTUNApy
  • Installation
  • Usage
    • Before start
    • How to get API keys
    • Step 1 — Search PubMed
    • Step 2 — Extract text
    • Step 3 — Query PubChem
    • Step 4 — Curate SMILES
    • Next steps
  • Citation
  • API Reference
    • PubChemSearcher
      • fetch_compound_info()
    • PubMedSearcher
      • fetch_articles()
    • SMILEScuration
      • standardize()
    • TextExtract
      • LLMTextExtractor
        • LLMTextExtractor.prompt
        • LLMTextExtractor.variables
        • LLMTextExtractor.system_message
        • LLMTextExtractor.define_dynamic_response_format()
        • LLMTextExtractor.prompt_template()
        • LLMTextExtractor.fetch_gpt_data()
        • LLMTextExtractor.fetch_claude_data()
        • LLMTextExtractor.fetch_llama_data()
        • LLMTextExtractor.fetch_gemini_data()
        • LLMTextExtractor.process_articles()
aTUNApy
  • aTUNApy documentation
  • Edit on GitHub

aTUNApy documentation

aTUNApy workflow
  • Installation
  • Usage
    • Before start
    • How to get API keys
    • Step 1 — Search PubMed
    • Step 2 — Extract text
    • Step 3 — Query PubChem
    • Step 4 — Curate SMILES
    • Next steps
  • Citation
  • API Reference
    • PubChemSearcher
    • PubMedSearcher
    • SMILEScuration
    • TextExtract
Next

© Copyright 2026, Aylin del Moral-Morales.

Built with Sphinx using a theme provided by Read the Docs.